Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015809935.1_cds_XP_016496007.1_10272
CDS Infomation

[gene=LOC107815014] [db_xref=GeneID:107815014] [protein=LOW QUALITY PROTEIN: FAD-dependent urate hydroxylase-like] [exception=unclassified translation discrepancy] [protein_id=XP_016496007.1] [location=join(14967..15220,15883..16029,17033..17098,17184..17346,17609..17837,18354..18695,18698..18858)] [gbkey=CDS]
Sequence

ATGGCTTTATCCTCTTCCAATCTATTACTTGTGAAGTCGCAAAACTCTCTTTATTCTTCT
TCTAACCCAACAATTTATTTCAAACGAAGTACTTCTTCAGTACCCCAACAACCATGGTTA
CCAGCTGAAACTAGAGTTAGAGTCAGGCCTATTTCTTTATCCATTATAAATGCTCGAACT
GATGATAGAAAAGAAGATATTGTTATTATCGGGGCTGGAATTGCTGGCCTTGCTACTGCT
GTTTCACTTCAGAGGCTGGGTATTAGAACATTGGTGCTTGAGCAGGCTGAGTCGCTGAGA
ACTGGAGGAACGTCACTAACACTTTTTAAAAATGGATGGAAGGCACTGGATGCTATTGGA
GTTGGCAATGATCTCAGGACTCAGTTTCTTGAAATTCAAGGGATGGTGGTAAAATCAGAA
GATGGAAGAGAGTTGCGCTCCTTCAGATTCAAAGATGAGGATGAAAGTCAAGAAGTCCGA
GCTGTGGAGAGGAGAGTCCTACTGGAAACACTTGCCAGTAAGCTGCCACCAGATGCTATC
TCTTTTTCCTCAAAGCTGGCAAACATTGAAAGAAGTGAAAATGGTGAAACAATGCTGGAA
CTTGAAGATGGAATTCGCATATCTGCCAAGATATTAATCGCTTGTGATGGGGTTCGGTCG
CCAGTGGCCAAGTGGATGGGATTTCCAGAGCCTAACTATGTAGGACATTGTGCATTTCGA
GGCCTAGCATATTTCCCTCAAGGACAACCATTTGAACCAAAAGTAAACTACATCTATGGA
AGAGGAGTGCGCGCTGGATATGTTCCTGTCTCTGAAACCAAGGTCTATTGGTTTATCTGC
TACAATAGCTCGTCACCAGGTCCAAAGGTAACAGATCCATCCATCTTGAGACAGCAGGCT
GAACAACTCGTTAGAAATTGGCCAACAGACCTAATAAACCTCATTAAACTTACACCAGAT
AACACAATCATAAGAAGTAGCCTAGTAGATAGATGGCTTTGGCCCTCAATAAGCCCACCA
GCCTCTACTGGAAGTATAGTGCTGGTTGGTGATGCATGGCACCCAATGACACCAAACCTT
GGTCAAGGTGGTTGTTGTGCACTCGAAGATTCAATAGTTTTGACCAAAAAACTTACAGAA
GCAATCAAGTATAAACGTATTTCTGTCGAAGATGCACTCAAAGCATATGAAACTGAAAGA
TCTCGTATATTTCCATTAACGCTACGTGCATATCTTGTGGGTGCACTATTGCAGTGGGAT
AATCCAGTGATTTGTTCCCTTAGGGATAATATCATTGTACCTAAGCTGGTTAGACTTGGT
CCAATTCTGGAGCATACAAATTTTGAATTTGAGCCTCTATAA

Peptide Sequence

PEP ID

XP_016496007.1
PEP Infomation

PREDICTED: LOW QUALITY PROTEIN: FAD-dependent urate hydroxylase-like [Nicotiana tabacum]
Sequence

MALSSSNLLLVKSQNSLYSSSNPTIYFKRSTSSVPQQPWLPAETRVRVRPISLSIINART
DDRKEDIVIIGAGIAGLATAVSLQRLGIRTLVLEQAESLRTGGTSLTLFKNGWKALDAIG
VGNDLRTQFLEIQGMVVKSEDGRELRSFRFKDEDESQEVRAVERRVLLETLASKLPPDAI
SFSSKLANIERSENGETMLELEDGIRISAKILIACDGVRSPVAKWMGFPEPNYVGHCAFR
GLAYFPQGQPFEPKVNYIYGRGVRAGYVPVSETKVYWFICYNSSSPGPKVTDPSILRQQA
EQLVRNWPTDLINLIKLTPDNTIIRSSLVDRWLWPSISPPASTGSIVLVGDAWHPMTPNL
GQGGCCALEDSIVLTKKLTEAIKYKRISVEDALKAYETERWXRIFPLTLRAYLVGALLQW
DNPVICSLRDNIIVPKLVRLGPILEHTNFEFEPL

Transcript Sequence

Gene sequence data has not been registered.